Progenesis SameSpots software references
2010
Albrecht D, Kniemeyer O, Brakhage AA, Guthke R (2010) Missing values in gel-based proteomics. Proteomics (in Press)
Bancel E, Rogniaux H, Debiton C, Chambon C, Branlard G. Extraction and Proteome Analysis of Starch Granule-Associated Proteins in Mature Wheat Kernel (Triticum aestivum L.). J. Proteome Res., 2010, 9 (6), pp 3299–3310
Banfi C, Parolari A, Brioschi M, Barcella S, Loardi C, Centenaro C, Alamanni F, Mussoni F, Tremoli E. Proteomic Analysis of Plasma from Patients Undergoing Coronary Artery Bypass Grafting Reveals a Protease/Antiprotease Imbalance in Favor of the Serpin r1-Antichymotrypsin. J. Proteome Res., 2010, 9 (5), pp 2347–2357
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Betancourt AM, Mobley JA, Russo J, Lamartiniere CA (2010) Proteomic Analysis in Mammary Glands of Rat Offspring Exposed In Utero to Bisphenol A. J Proteomics (in Press)
Caperna TJ, Shannona AE, Blomberga LA, Garretta WM, Ramsaya TG. Identification of protein carbonyls in serum of the fetal and neonatal pig. Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology. Volume 156, Issue 3, July 2010, Pages 189-196 (available online 27 March 2010).
Chevalier F, Kelly AL. Proteomic Quantification of Disulfide-Linked Polymers in Raw and Heated Bovine Milk. J. Agric. Food Chem., Publication Date (Web): May 26, 2010.
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Donoghue P, Staunton L, Mullen E, Manning G, Ohlendieck K (2010) DIGE analysis of rat skeletal muscle proteins using nonionic detergent phase extraction of young adult versus aged gastrocnemius tissue. J Proteomics (in Press)
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Irigoyen C, Soria J, Acera A, Suarez-Cortes TM, Mendicute J. Proteomic Analysis of Lens Soluble Fraction in Different Types of Cataracts. Association for Research in Vision and Ophthalmology 2010 meeting abstract and oral presentation, May 2010.
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Lau TY, Power KA, Dijon S, de Gardelle I, McDonnell S, Duffy MJ, Pennington SR, Gallagher WM (2010) Prioritization of candidate protein biomarkers from an in vitro model system of breast tumor progression toward clinical verification. J Proteome Res 9:1450-1459
Lewis C, Ohlendieck K. Proteomic profiling of naturally protected extraocular muscles from the 3 dystrophin-deficient mdx mouse. Biochem Biophys Res Commun. 2010 May 21. Epub ahead of print.
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Marco-Ramell A, Bassols A. Enrichment of low-abundance proteins from bovine and porcine serum samples for proteomic studies. Res Vet Sci. 2010 Apr 3. Epub ahead of print.
McManus CA, Polden J, Cotter DR, Dunn MJ. Two-dimensional reference map for the basic proteome of the human dorsolateral prefrontal cortex (dlPFC) of the prefrontal lobe region of the brain. Proteomics. 2010 Apr 29. Epub ahead of print.
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Paradis F, Moore HS, Pasternak JA, Novak S, Dyck MK, Dixon WT, Foxcroft GR (2010) Pig preovulatory oocytes modulate cumulus cell protein and gene expression in vitro. Mol Cell Endocrinol (in Press)
Pennington K, Peng J, Hung C-C, Banks RE, Robinson PA. Differential Effects of Wild-Type and A53T Mutant Isoform of Alpha-Synuclein on the Mitochondrial Proteome of Differentiated SH-SY5Y Cells. J. Proteome Res., 2010, 9 (5), pp 2390–2401
Polaskova V, Kapur A, Khan A, Molloy MP, Baker MS (2010) High-abundance protein depletion: comparison of methods for human plasma biomarker discovery. Electrophoresis 31:471-482
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Portmann-Lanz CB, Schoeberlein A, Portmann R, Mohr S, Rollini P, Sager R, Surbek DV (2010) Turning placenta into brain: placental mesenchymal stem cells differentiate into neurons and oligodendrocytes. Am J Obstet Gynecol 202:294 e291-294 e211
Qureshi MI, D’Amici GM, Fagioni M, Rinalducci S, Zolla L. Iron stabilizes thylakoid protein-pigment complexes in Indian mustard during Cd-phytoremediation as revealed by BN-SDS-PAGE and ESI-MS/MS. J Plant Physiol. 2010 Jul 1;167(10):761-70.
Recorbet G, Valot B, Robert F, Gianinazzi-Pearson V, Dumas-Gaudot E (2010) Identification of in planta-expressed arbuscular mycorrhizal fungal proteins upon comparison of the root proteomes of Medicago truncatula colonised with two Glomus species. Fungal Genet Biol (in Press)
Roma-Rodrigues C, Santos PM, Benndorf D, Rapp E, Sa-Correia I (2010) Response of Pseudomonas putida KT2440 to phenol at the level of membrane proteome. J Proteomics (in Press)
Siciliano A, Turrini F, Bertoldi M, Matte A, Pantaleo A, Olivieri O, De Franceschi L (2010) Deoxygenation affects tyrosine phosphoproteome of red cell membrane from patients with sickle cell disease. Blood Cells Mol Dis (in Press)
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Slany A, Haudek VJ, Zwickl H, Gundacker NC, Grusch M, Weiss TS, Seir K, Rodgarkia-Dara C, Hellerbrand C, Gerner C (2010) Cell characterization by proteome profiling applied to primary hepatocytes and hepatocyte cell lines Hep-G2 and Hep-3B. J Proteome Res 9:6-21
Suarez G, Sierra JC, Erova TE, Sha J, Horneman AJ, Chopra AK (2010) A type VI secretion system effector protein, VgrG1, from Aeromonas hydrophila that induces host cell toxicity by ADP ribosylation of actin. J Bacteriol 192:155-168
Wang Y, Carolan JC, Hao F, Nicholson JK, Wilkinson TL, Douglas AE (2010) Integrated metabonomic-proteomic analysis of an insect-bacterial symbiotic system. J Proteome Res 9:1257-1267
Wasinpiyamongkol L, Patramool S, Luplertlop N, Surasombatpattana P, Doucoure S, Mouchet F, Séveno M, Remoue F, Demettre E, Brizard J-P, Jouin P, Biron DG, Thomas F, Missé D. Blood-feeding and immunogenic Aedes aegypti saliva proteins. Proteomics Volume 10 Issue 10, Pages 1906 – 1916.
Yang F, Jensen JD, Spliid NH, Svensson B, Jacobsen S, Jorgensen LN, Jorgensen HJ, Collinge DB, Finnie C (2010) Investigation of the effect of nitrogen on severity of Fusarium head blight in barley. J Proteomics 73:743-752
2009
Aloui A, Recorbet G, Gollotte A, Robert F, Valot B, Gianinazzi-Pearson V, Aschi-Smiti S, Dumas-Gaudot E (2009) On the mechanisms of cadmium stress alleviation in Medicago truncatula by arbuscular mycorrhizal symbiosis: a root proteomic study. Proteomics 9:420-433
Alvarez S, Berla BM, Sheffield J, Cahoon RE, Jez JM, Hicks LM (2009) Comprehensive analysis of the Brassica juncea root proteome in response to cadmium exposure by complementary proteomic approaches. Proteomics 9:2419-2431
Baudouin-Cornu P, Lagniel G, Chedin S, Labarre J (2009) Development of a new method for absolute protein quantification on 2-D gels. Proteomics 9:4606-4615
Bech-Serra JJ, Borthwick A, Colome N, Albar JP, Wells M, Sanchez del Pino M, Canals F (2009) A multi-laboratory study assessing reproducibility of a 2D-DIGE differential proteomic experiment. J Biomol Tech 20:293-296
Bonhomme L, Monclus R, Vincent D, Carpin S, Claverol S, Lomenech AM, Labas V, Plomion C, Brignolas F, Morabito D (2009) Genetic variation and drought response in two Populus x euramericana genotypes through 2-DE proteomic analysis of leaves from field and glasshouse cultivated plants. Phytochemistry 70:988-1002
Bonhomme L, Monclus R, Vincent D, Carpin S, Lomenech AM, Plomion C, Brignolas F, Morabito D (2009) Leaf proteome analysis of eight Populus xeuramericana genotypes: genetic variation in drought response and in water-use efficiency involves photosynthesis-related proteins. Proteomics 9:4121-4142
Bortner JD, Das A, Umstead TM, Freeman WM, Somiari R, Aliaga C, Phelps DS, El-Bayoumy K (2009) Down-Regulation of 14-3-3 Isoforms and Annexin A5 Proteins in Lung Adenocarcinoma - Induced by the Tobacco-Specific Nitrosamine NNK in the A/J Mouse Revealed by Proteomic Analysis. J Proteome Res 8:4050-4061
Bowick GC, Spratt HM, Hogg AE, Endsley JJ, Wiktorowicz JE, Kurosky A, Luxon BA, Gorenstein DG, Herzog NK (2009) Analysis of the differential host cell nuclear proteome induced by attenuated and virulent hemorrhagic arenavirus infection. J Virol 83:687-700
Burniston JG (2009) Adaptation of the rat cardiac proteome in response to intensity-controlled endurance exercise. Proteomics 9:106-115
Cash P, Argo E (2009) Analysis of bacterial proteins by 2DE. Methods Mol Biol 519:131-144
Chen J, Hannan N, Mak Y, Nicholls P, Zhang J, Rainczuk A, Stanton P, Robertson D, Salamonsen L, Stephens A (2009) Proteomic Characterization of Mid-Proliferative and Mid-Secretory Human Endometrium. J Proteome Res 8:2032-2044
Cilia M, Fish T, Yang X, McLaughlin M, Thannhauser TW, Gray S (2009) A comparison of protein extraction methods suitable for gel-based proteomic studies of aphid proteins. J Biomol Tech 20:201-215
Deighton RF, Short DM, McGregor RJ, Gow AJ, Whittle IR, McCulloch J (2009) The utility of functional interaction and cluster analysis in CNS proteomics. J Neurosci Methods 180:321-329
Desclos M, Etienne P, Coquet L, Jouenne T, Bonnefoy J, Segura R, Reze S, Ourry A, Avice JC (2009) A combined 15N tracing/proteomics study in Brassica napus reveals the chronology of proteomics events associated with N remobilisation during leaf senescence induced by nitrate limitation or starvation. Proteomics 9:3580-3608
Diz AP, Dudley E, MacDonald BW, Pina B, Kenchington EL, Zouros E, Skibinski DO (2009) Genetic variation underlying protein expression in eggs of the marine mussel Mytilus edulis. Mol Cell Proteomics 8:132-144
Endoh T, Engel JN (2009) CbpA: a polarly localized novel cAMP-binding protein in Pseudomonas aeruginosa. J Bacteriol 191:7193-7205
Fagioni M, D'Amici GM, Timperio AM, Zolla L (2009) Proteomic analysis of multiprotein complexes in the thylakoid membrane upon cadmium treatment. J Proteome Res 8:310-326
Fagioni M, Zolla L (2009) Does the different proteomic profile found in apical and basal leaves of spinach reveal a strategy of this plant toward cadmium pollution response? J Proteome Res 8:2519-2529
Fang Q, Strand A, Law W, Faca VM, Fitzgibbon MP, Hamel N, Houle B, Liu X, May DH, Poschmann G, Roy L, Stuhler K, Ying W, Zhang J, Zheng Z, Bergeron JJ, Hanash S, He F, Leavitt BR, Meyer HE, Qian X, McIntosh MW (2009) Brain-specific proteins decline in the cerebrospinal fluid of humans with Huntington disease. Mol Cell Proteomics 8:451-466
Gannon J, Doran P, Kirwan A, Ohlendieck K (2009) Drastic increase of myosin light chain MLC-2 in senescent skeletal muscle indicates fast-to-slow fibre transition in sarcopenia of old age. Eur J Cell Biol 88:685-700
Garcia V, Stevens R, Gil L, Gilbert L, Gest N, Petit J, Faurobert M, et al. (2009) An integrative genomics approach for deciphering the complex interactions between ascorbate metabolism and fruit growth and composition in tomato. C R Biol 332:1007-1021
Gibson DS, Blelock S, Curry J, Finnegan S, Healy A, Scaife C, McAllister C, Pennington S, Dunn M, Rooney M (2009) Comparative analysis of synovial fluid and plasma proteomes in juvenile arthritis--proteomic patterns of joint inflammation in early stage disease. J Proteomics 72:656-676
Gonzalez H, Ottervald J, Nilsson KC, Sjogren N, Miliotis T, Von Bahr H, Khademi M, Eriksson B, Kjellstrom S, Vegvari A, Harris R, Marko-Varga G, Borg K, Nilsson J, Laurell T, Olsson T, Franzen B (2009) Identification of novel candidate protein biomarkers for the post-polio syndrome - implications for diagnosis, neurodegeneration and neuroinflammation. J Proteomics 71:670-681
Grassl J, Westbrook JA, Robinson A, Boren M, Dunn MJ, Clyne RK (2009) Preserving the yeast proteome from sample degradation. Proteomics 9:4616-4626
Grebaut P, Chuchana P, Brizard JP, Demettre E, Seveno M, Bossard G, Jouin P, Vincendeau P, Bengaly Z, Boulange A, Cuny G, Holzmuller P (2009) Identification of total and differentially expressed excreted-secreted proteins from Trypanosoma congolense strains exhibiting different virulence and pathogenicity. Int J Parasitol 39:1137-1150
Grove H, Hollung K, Moldestad A, Faergestad EM, Uhlen AK (2009) Proteome Changes in Wheat Subjected to Different Nitrogen and Sulfur Fertilizations. J Agric Food Chem (In Press)
Hannan NJ, Stoikos CJ, Stephens AN, Salamonsen LA (2009) Depletion of high-abundance serum proteins from human uterine lavages enhances detection of lower-abundance proteins. J Proteome Res 8:1099-1103
Haudek VJ, Slany A, Gundacker NC, Wimmer H, Drach J, Gerner C (2009) Proteome maps of the main human peripheral blood constituents. J Proteome Res 8:3834-3843
Holloway KV, O'Gorman M, Woods P, Morton JP, Evans L, Cable NT, Goldspink DF, Burniston JG (2009) Proteomic investigation of changes in human vastus lateralis muscle in response to interval-exercise training. Proteomics 9:5155-5174
Jia X, Veiseth-Kent E, Grove H, Kuziora P, Aass L, Hildrum KI, Hollung K (2009) Peroxiredoxin-6--a potential protein marker for meat tenderness in bovine longissimus thoracis muscle. J Anim Sci 87:2391-2399
Joss JL, Molloy MP, Hinds L, Deane E (2009) A longitudinal study of the protein components of marsupial milk from birth to weaning in the tammar wallaby (Macropus eugenii). Dev Comp Immunol 33:152-161
Kang Y, Techanukul T, Mantalaris A, Nagy JM (2009) Comparison of three commercially available DIGE analysis software packages: minimal user intervention in gel-based proteomics. J Proteome Res 8:1077-1084
Karp NA, Lilley KS (2009) Investigating sample pooling strategies for DIGE experiments to address biological variability. Proteomics 9:388-397
Kilpatrick LM, Stephens AN, Hardman BM, Salamonsen LA, Li Y, Stanton PG, Nie G (2009) Proteomic Identification of Caldesmon as a Physiological Substrate of Proprotein Convertase 6 in Human Uterine Decidual Cells Essential for Pregnancy Establishment. J Proteome Res 8:4983-4992
Kim SM, Kumar V, Lin YQ, Karunanithi S, Ramaswami M (2009) Fos and Jun potentiate individual release sites and mobilize the reserve synaptic vesicle pool at the Drosophila larval motor synapse. Proc Natl Acad Sci U S A 106:4000-4005
Lam L, Tsoutsman T, Arthur J, Semsarian C (2009) Differential protein expression profiling of myocardial tissue in a mouse model of hypertrophic cardiomyopathy. J Mol Cell Cardiol (In Press)
Marcellin E, Chen WY, Nielsen LK (2009) Understanding plasmid effect on hyaluronic acid molecular weight produced by Streptococcus equi subsp. zooepidemicus. Metab Eng 12:62-69
Martinez-Esteso MJ, Selles-Marchart S, Vera-Urbina JC, Pedreno MA, Bru-Martinez R (2009) Changes of defense proteins in the extracellular proteome of grapevine (Vitis vinifera cv. Gamay) cell cultures in response to elicitors. J Proteomics 73:331-341
Monge M, Doll A, Colas E, Gil-Moreno A, Castellvi J, Garcia A, Colome N, Perez-Benavente A, Pedrola N, Lopez-Lopez R, Dolcet X, Ramon y Cajal S, Xercavins J, Matias-Guiu X, Canals F, Reventos J, Abal M (2009) Subtractive proteomic approach to the endometrial carcinoma invasion front. J Proteome Res 8:4676-4684
O'Connell K, Ohlendieck K (2009) Proteomic DIGE analysis of the mitochondria-enriched fraction from aged rat skeletal muscle. Proteomics 24:5509-5524
Pedreschi R, Hertog M, Robben J, Lilley KS, Karp NA, Baggerman G, Vanderleyden J, Nicolai B (2009) Gel-based proteomics approach to the study of metabolic changes in pear tissue during storage. J Agric Food Chem 57:6997-7004
Robinson AA, Westbrook JA, English JA, Boren M, Dunn MJ (2009) Assessing the use of thermal treatment to preserve the intact proteomes of post-mortem heart and brain tissue. Proteomics 9:4433-4444
Romesser PB, Perlman DH, Faller DV, Costello CE, McComb ME, Denis GV (2009) Development of a malignancy-associated proteomic signature for diffuse large B-cell lymphoma. Am J Pathol 175:25-35
Sheoran IS, Ross AR, Olson DJ, Sawhney VK (2009) Differential expression of proteins in the wild type and 7B-1 male-sterile mutant anthers of tomato (Solanum lycopersicum): a proteomic analysis. J Proteomics 71:624-636
Stella CL, Bennett MR, Devarajan P, Greis K, Wyder M, Macha S, Rao M, Jodicke C, Moussa H, How HY, Myatt L, Webster R, Sibai BM (2009) Preterm labor biomarker discovery in serum using 3 proteomic profiling methodologies. Am J Obstet Gynecol 201:387 e381-313
Takeshita M, Ishida Y, Akamatsu E, Ohmori Y, Sudoh M, Uto H, Tsubouchi H, Kataoka H (2009) Proanthocyanidin from blueberry leaves suppresses expression of subgenomic hepatitis C virus RNA. J Biol Chem 284:21165-21176
Timperio AM, D'Alessandro A, Pariset L, D'Amici GM, Valentini A, Zolla L (2009) Comparative proteomics and transcriptomics analyses of livers from two different Bos taurus breeds: "Chianina and Holstein Friesian". J Proteomics 73:309-322
Tsolakos N, Techanukul T, Wallington A, Zhao Y, Jones C, Nagy J, Wheeler JX (2009) Comparison of two combinations of cyanine dyes for prelabelling and gel electrophoresis. Proteomics 9:1727-1730
Umstead TM, Freeman WM, Chinchilli VM, Phelps DS (2009) Age-related changes in the expression and oxidation of bronchoalveolar lavage proteins in the rat. Am J Physiol Lung Cell Mol Physiol 296:L14-29
Valcu CM, Junqueira M, Shevchenko A, Schlink K (2009) Comparative proteomic analysis of responses to pathogen infection and wounding in Fagus sylvatica. J Proteome Res 8:4077-4091
Yang F, Jensen JD, Spliid NH, Svensson B, Jacobsen S, Jorgensen LN, Jorgensen HJ, Collinge DB, Finnie C (2009) Investigation of the effect of nitrogen on severity of Fusarium Head Blight in barley. J Proteomics 73:743-752
Zhou S, Sauve R, Thannhauser TW (2009) Proteome changes induced by aluminium stress in tomato roots. J Exp Bot 60:1849-1857
2008
Burniston JG (2008) Changes in the rat skeletal muscle proteome induced by moderate-intensity endurance exercise. Biochim Biophys Acta 1784: 1077-1086.
Cieniewski-Bernard C, Acosta A, Dubois E, Lamblin N, Beseme O, Chwastyniak M, Amouyel P, Bauters C, Pinet F (2008) Proteomic analysis in cardiovascular diseases. Clin Exp Pharmacol Physiol 35: 362-366.
Desclos M, Dubousset L, Etienne P, Le Caherec F, Satoh H, Bonnefoy J, Ourry A, Avice JC (2008) A proteomic profiling approach to reveal a novel role of Brassica napus drought 22 kD/water-soluble chlorophyll-binding protein in young leaves during nitrogen remobilization induced by stressful conditions. Plant Physiol 147: 1830-1844.
Dhiman M, Nakayasu ES, Madaiah YH, Reynolds BK, Wen JJ, Almeida IC, Garg NJ (2008) Enhanced nitrosative stress during Trypanosoma cruzi infection causes nitrotyrosine modification of host proteins: implications in Chagas' disease. Am J Pathol 173: 728-740.
Fanous A, Weiss W, Gorg A, Jacob F, Parlar H (2008) A proteome analysis of the cadmium and mercury response in Corynebacterium glutamicum. Proteomics.
Gillet LC, Namoto K, Ruchti A, Hoving S, Boesch D, Inverardi B, Mueller D, Coulot M, Schindler P, Schweigler P, Bernardi A, Gil-Parrado S (2008) In-cell selectivity profiling of serine protease inhibitors by activity-based proteomics. Mol Cell Proteomics 7: 1241-1253.
Grove H, Jorgensen BM, Jessen F, Sondergaard I, Jacobsen S, Hollung K, Indahl U, Faergestad EM (2008) Combination of Statistical Approaches for Analysis of 2-DE Data Gives Complementary Results. J Proteome Res. (In Press)
Joss JL, Molloy MP, Hinds L, Deane E (2008) A longitudinal study of the protein components of marsupial milk from birth to weaning in the tammar wallaby (Macropus eugenii). Dev Comp Immunol 33: 152-161.
Karp NA, Feret R, Rubtsov DV, Lilley KS (2008) Comparison of DIGE and post-stained gel electrophoresis with both traditional and SameSpots analysis for quantitative proteomics. Proteomics 8: 948-960.
Meyer VS, Kastenmuller W, Gasteiger G, Franz-Wachtel M, Lamkemeyer T, Rammensee HG, Stevanovic S, Sigurdardottir D, Drexler I (2008) Long-term immunity against actual poxviral HLA ligands as identified by differential stable isotope labeling. J Immunol 181: 6371-6383.
Mikhaylova O, Ignacak ML, Barankiewicz TJ, Harbaugh SV, Yi Y, Maxwell PH, Schneider M, Van Geyte K, Carmeliet P, Revelo MP, Wyder M, Greis KD, Meller J, Czyzyk-Krzeska MF (2008) The von Hippel-Lindau tumor suppressor protein and Egl-9-Type proline hydroxylases regulate the large subunit of RNA polymerase II in response to oxidative stress. Mol Cell Biol 28: 2701-2717.
Morris JS, Clark BN, Gutstein HB (2008) Pinnacle: a fast, automatic and accurate method for detecting and quantifying protein spots in 2-dimensional gel electrophoresis data. Bioinformatics 24: 529-536.
Pandhal J, Wright PC, Biggs CA (2008) Proteomics with a pinch of salt: A cyanobacterial perspective. Saline Systems 4:1.
Panopoulos P, Mauro VP (2008) Antisense Masking Reveals Contributions of mRNA-rRNA Base Pairing to Translation of Gtx and FGF2 mRNAs. J Biol Chem 283: 33087-33093.
Rye MB, Faergestad EM, Martens H, Wold JP, Alsberg BK (2008) An improved pixel-based approach for analyzing images in two-dimensional gel electrophoresis. Electrophoresis 29: 1382-1393.
Seferovic MD, Krughkov V, Pinto D, Han VK, Gupta MB (2008) Quantitative 2-D gel electrophoresis-based expression proteomics of albumin and IgG immunodepleted plasma. J Chromatogr B Analyt Technol Biomed Life Sci 865: 147-152.
Sihlbom C, Kanmert I, Bahr H, Davidsson P (2008) Evaluation of the Combination of Bead Technology with SELDI-TOF-MS and 2-D DIGE for Detection of Plasma Proteins. J Proteome Res 7: 4191-4198.
Spiess PC, Morin D, Jewell WT, Buckpitt AR (2008) Measurement of protein sulfhydryls in response to cellular oxidative stress using gel electrophoresis and multiplexed fluorescent imaging analysis. Chem Res Toxicol 21: 1074-1085.
Starosta V, Pazdrak K, Boldogh I, Svider T, Kurosky A (2008) Lipoxin A4 counterregulates GM-CSF signaling in eosinophilic granulocytes. J Immunol 181: 8688-8699.
Stead DA, Paton NW, Missier P, Embury SM, Hedeler C, Jin B, Brown AJ, Preece A (2008) Information quality in proteomics. Brief Bioinform 9: 174-188.
Vasudev NS, Ferguson RE, Cairns DA, Stanley AJ, Selby PJ, Banks RE (2008) Serum biomarker discovery in renal cancer using 2-DE and prefractionation by immunodepletion and isoelectric focusing; increasing coverage or more of the same? Proteomics.
Yang X, Thannhauser TW, Burrows M, Cox-Foster D, Gildow FE, Gray SM (2008) Coupling
genetics and proteomics to identify aphid proteins associated with vector-specific
transmission of polerovirus (luteoviridae). J Virol 82: 291-299.
2007
Berth M, Moser FM, Kolbe M, Bernhardt J (2007) The state of the art in the analysis of two-dimensional gel electrophoresis images. Appl Microbiol Biotechnol 76: 1223-1243.
Greene ND, Bamidele A, Choy M, de Castro SC, Wait R, Leung KY, Begum S, Gadian DG, Scott RC, Lythgoe MF (2007) Proteome changes associated with hippocampal MRI abnormalities in the lithium pilocarpine-induced model of convulsive status epilepticus. Proteomics 7: 1336-1344.
Khan A, Williams KL, Soon J, Nevalainen HK (2008) Proteomic analysis of the knob-producing
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Lam L, Arthur J, Semsarian C (2007) Proteome map of the normal murine ventricular
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Stockwin LH, Bumke MA, Yu SX, Webb SP, Collins JR, Hollingshead MG, Newton DL (2007) Proteomic Analysis Identifies Oxidative Stress Induction by Adaphostin. Clin Cancer Res 13: 3667-3681.
Witzel K, Surabhi GK, Jyothsnakumari G, Sudhakar C, Matros A, Mock HP (2007) Quantitative proteome analysis of barley seeds using ruthenium(II)-tris-(bathophenanthroline-disulphonate) staining. J Proteome Res 6: 1325-1333.
2006
Miller I, Crawford J, Gianazza E (2006) Protein stains for proteomic applications: which, when, why? Proteomics 6: 5385-5408
